Papers

Some papers

• Itzkovic, S. and Alon, U. (2005) Subgraphs and network motifs in geometric networks. Physical Review. 71(2)
• Wernicke, S. (2006) Efficient Detection of Network Motifs. Transactions On Computational Biology and Bioinformatics. 3(4):347-359

http://www.slideshare.net/florianmarkowetz/network-biology-lent-2010-lecture-1-3322887

DOT Export appears to work but the file output needs the semantics removed (e.g. node24 [label="Compound 24", shape=box, color=white, width=1.63, height=1.63, fixedsize="true"]).