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Jul 7th
Created txt files of the network, removing the semantics:
- 1 File seperated by spaces
- 1 File separataed by tabs
In the format:
node# relation_type node#
Round the Twist
Jun 2nd
Going around in circles today trying to get Concept ‘proper’ names for compounds (i.e. Cholic Acid), blast scores etc…
Iterator Solved
May 26th
The iterator problem has been solved by updating the version of ondex-mini to the latest version on the nexus repository.
Iterating ONDEXView
May 20th
- Extracted debugger version of Ondex-mini
- Put emanticmotif-0.1.1-SNAPSHOT-jar-with-dependencies.jar in plugin folder
- Created test.xml workflow
- oxl parser worked but semanticmotif.Filter failed – Unable to iterate through items : ONDEXIterator/Iterator is broken/missing.
relationview.Iterator().get(i);
realationview.getEntity(i);
NoSuchMethodError.
