The previous code used to count the abstract semantic motif within the data has been modified and extended so now it correctly functions. (i.e. coded in the latest version of java, new ondex functions, ondex deprecated methods etc…).

Testing gave :-

  • 157 semantic motifs for the cutdown_set.xml.gz dataset.
  • 26,693 sematnic motifs for the ib2010_data.xml.gz dataset.

Which is the same as what the paper stated, showing the newest code is working correctly.